STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0534KEGG: ajs:Ajs_3882 hypothetical protein. (129 aa)    
Predicted Functional Partners:
Daci_1391
KEGG: ajs:Ajs_3741 hypothetical protein.
  
     0.536
Daci_0533
PFAM: conserved hypothetical protein; KEGG: aav:Aave_4503 uncharacterized protein UPF0065.
       0.503
Daci_0535
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: aav:Aave_4499 transcriptional regulator, XRE family.
       0.469
Daci_0301
PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0162 hypothetical protein.
  
     0.466
Daci_0537
PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase.
 
   
 0.456
Daci_4373
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0595 putative outer membrane receptor signal peptide protein.
  
 
 
 0.445
Daci_0475
KEGG: mpt:Mpe_A1625 putative outer membrane cation efflux protein.
 
  
 0.432
Daci_4779
PFAM: SPW repeat; KEGG: pol:Bpro_2330 hypothetical protein.
  
   
 0.427
Daci_4870
KEGG: ajs:Ajs_1766 putative transmembrane protein.
  
     0.418
Daci_0646
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: aav:Aave_4387 flagellar motor switch protein FliN.
   
 
 0.407
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.