Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0559PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_3864 auxin efflux carrier. (316 aa)    
Predicted Functional Partners:
Daci_2106
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: aav:Aave_1095 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
  
  
 0.588
Daci_6030
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: aav:Aave_4759 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
  
  
 0.588
Daci_0561
PFAM: glycosyl transferase family 2; KEGG: aav:Aave_0599 glycosyl transferase, family 2.
  
  
 0.545
Daci_0560
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; KEGG: rpb:RPB_0468 hypothetical protein.
  
    0.532
Daci_0562
PFAM: GtrA family protein; KEGG: aav:Aave_0598 GtrA family protein.
       0.523
Daci_0563
PFAM: YdjC family protein; KEGG: aav:Aave_0597 hypothetical protein.
       0.523
Daci_0558
KEGG: dno:DNO_0148 hypothetical protein.
       0.494
Daci_2780
KEGG: aav:Aave_1528 hypothetical protein.
  
     0.463
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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