Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0574ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3953 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (630 aa)    
Predicted Functional Partners:
Daci_0573
PFAM: inner-membrane translocator; KEGG: vei:Veis_3952 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Daci_0572
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_3951 extracellular ligand-binding receptor.
 
  
 0.955
Daci_0575
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA3560 amino-acid composite ATP-binding transmembrane ABC transporter protein.
 
  
0.929
Daci_6024
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.816
Daci_0077
PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2950 extracellular ligand-binding receptor.
 
  
 0.815
Daci_0078
PFAM: inner-membrane translocator; KEGG: reh:H16_A1415 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.804
Daci_4820
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1003 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.804
Daci_4487
PFAM: inner-membrane translocator; KEGG: bbr:BB4421 probable branched-chain amino acid transport system, permease component.
 
  
 0.801
Daci_5354
PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.782
Daci_0031
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.773
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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