STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0579PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_4535 monooxygenase, FAD-binding. (558 aa)    
Predicted Functional Partners:
Daci_0580
PFAM: beta-lactamase domain protein; KEGG: vei:Veis_4551 beta-lactamase domain protein.
 
  
 0.920
Daci_4008
PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A2727 putative 3-(3-hydroxy-phenyl)propionate hydroxylase (MhpA).
  
  
 
0.912
Daci_0687
PFAM: ferredoxin; cytochrome P450; Oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5278 ferredoxin:cytochrome P450:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
 
 
 0.633
Daci_0571
PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family.
  
 
   0.559
Daci_3597
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_2077 maleylacetoacetate isomerase.
 
   
 0.547
Daci_0807
PFAM: regulatory protein TetR; KEGG: vei:Veis_3950 transcriptional regulator, TetR family.
  
 
   0.538
Daci_0294
PFAM: regulatory protein MarR; KEGG: aav:Aave_4468 transcriptional regulator, TrmB.
 
  
 0.507
Daci_1794
PFAM: regulatory protein MarR; KEGG: bra:BRADO6297 putative transcriptional regulatory protein, MarR family.
 
  
 0.500
Daci_0581
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bbt:BBta_4674 putative transcriptional regulatory protein.
 
   
 0.498
Daci_3700
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_3147 maleylacetoacetate isomerase.
 
   
 0.481
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.