Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0654PFAM: response regulator receiver; KEGG: vei:Veis_2177 response regulator receiver protein. (120 aa)    
Predicted Functional Partners:
Daci_0655
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_4378 CheA signal transduction histidine kinase.
 
 0.988
Daci_0656
PFAM: CheW domain protein; KEGG: vei:Veis_2175 putative CheW protein.
 
 
 0.939
Daci_0601
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
 0.933
Daci_0602
PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein.
 
 
0.922
Daci_0646
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: aav:Aave_4387 flagellar motor switch protein FliN.
   
 0.914
Daci_0741
PFAM: CheW domain protein; KEGG: rfr:Rfer_0924 CheW protein.
 
 
 0.892
Daci_5410
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer.
  
  0.885
Daci_4878
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpt:Mpe_A0750 methyl-accepting chemotaxis protein.
  
  0.883
Daci_5082
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_1017 methyl-accepting chemotaxis sensory transducer.
  
  0.883
Daci_0742
PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein.
  
  0.882
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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