STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0719PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger. (420 aa)    
Predicted Functional Partners:
Daci_0718
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.955
Daci_2519
KEGG: aav:Aave_3010 hypothetical protein.
  
     0.750
Daci_2901
KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A.
  
  
 0.748
Daci_4870
KEGG: ajs:Ajs_1766 putative transmembrane protein.
 
     0.741
Daci_2184
KEGG: aav:Aave_1969 hypothetical protein.
 
    0.722
Daci_2477
KEGG: pna:Pnap_1325 phosphoesterase, DHHA1.
 
     0.671
Daci_0832
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
     0.665
Daci_1840
KEGG: ajs:Ajs_3490 putative lipoprotein.
  
     0.663
Daci_4869
KEGG: ajs:Ajs_1767 putative transmembrane protein.
  
     0.653
Daci_4633
KEGG: pna:Pnap_1480 NAD-dependent epimerase/dehydratase.
  
     0.648
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.