STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0748KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane. (198 aa)    
Predicted Functional Partners:
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
  
  
 0.558
Daci_1574
PFAM: CheW domain protein; KEGG: ajs:Ajs_3576 putative CheW protein.
  
     0.493
Daci_5262
KEGG: aav:Aave_1195 putative transmembrane protein.
  
    0.487
Daci_4835
KEGG: aav:Aave_3091 putative uncharacterized conserved protein.
 
  
 0.486
Daci_0865
PFAM: Forkhead-associated protein; KEGG: aav:Aave_4680 FHA domain containing protein.
  
    0.469
Daci_1576
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: vei:Veis_3017 CheA signal transduction histidine kinases.
  
     0.461
Daci_3985
PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin.
  
     0.461
Daci_4834
PFAM: protein of unknown function DUF323; KEGG: aav:Aave_3090 protein of unknown function DUF323.
 
  
 0.454
Daci_5428
KEGG: ajs:Ajs_0900 hypothetical protein.
  
     0.427
Daci_3007
KEGG: ajs:Ajs_2549 hypothetical protein.
  
     0.400
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.