STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0766PFAM: von Willebrand factor type A; KEGG: fra:Francci3_2918 von Willebrand factor, type A. (536 aa)    
Predicted Functional Partners:
Daci_0764
KEGG: fra:Francci3_2920 hypothetical protein.
 
     0.933
Daci_0765
PFAM: toxic anion resistance family protein; KEGG: prw:PsycPRwf_2138 toxic anion resistance family protein; Belongs to the TelA family.
 
     0.836
Daci_0767
KEGG: mca:MCA1631 hypothetical protein.
 
     0.815
Daci_5745
KEGG: bvi:Bcep1808_1603 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
  
 
 0.795
Daci_0558
KEGG: dno:DNO_0148 hypothetical protein.
  
     0.500
Daci_3819
SMART: AAA ATPase; KEGG: pmy:Pmen_3386 hypothetical protein.
 
     0.483
Daci_4846
PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pna:Pnap_3739 ATPase associated with various cellular activities, AAA_5.
 
  
 0.473
Daci_4368
PFAM: protein of unknown function DUF181; KEGG: aav:Aave_3061 protein of unknown function DUF181.
  
     0.438
Daci_3820
PFAM: band 7 protein; KEGG: pmy:Pmen_3387 hypothetical protein.
  
     0.429
Daci_4844
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: pna:Pnap_3742 VWA containing CoxE family protein.
 
     0.425
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.