STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0865PFAM: Forkhead-associated protein; KEGG: aav:Aave_4680 FHA domain containing protein. (237 aa)    
Predicted Functional Partners:
Daci_0866
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative).
 
 
 0.832
Daci_3493
KEGG: ajs:Ajs_1822 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region.
    
 
 0.818
Daci_2030
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0925 protein kinase.
 
 
 
 0.814
Daci_4365
PFAM: protein kinase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_3066 serine/threonine protein kinase.
 
 
 
 0.813
Daci_3498
SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_1827 protein phosphatase 2C domain protein.
 
 
 0.775
Daci_2031
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ajs:Ajs_0924 protein phosphatase 2C domain protein.
 
 
 0.771
Daci_1458
KEGG: vei:Veis_4558 hypothetical protein.
 
    0.769
Daci_3838
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aav:Aave_1466 serine/threonine protein kinase.
 
 
 
 0.710
Daci_5428
KEGG: ajs:Ajs_0900 hypothetical protein.
  
     0.696
Daci_2385
PFAM: protein of unknown function DUF58; KEGG: ajs:Ajs_2815 protein of unknown function DUF58.
 
     0.677
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.