STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0872PFAM: protein of unknown function DUF6 transmembrane; KEGG: esa:ESA_02149 hypothetical protein. (306 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
       0.707
Daci_0871
KEGG: vei:Veis_0689 hypothetical protein.
       0.701
Daci_5934
PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone.
  
    0.462
Daci_5937
PFAM: pili assembly chaperone; KEGG: bam:Bamb_4023 pili assembly chaperone.
  
    0.461
Daci_5754
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bch:Bcen2424_4448 YbaK/prolyl-tRNA synthetase associated region.
 
     0.435
Daci_5935
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein.
  
     0.430
Daci_3353
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 probable TonB-dependent receptor.
  
     0.423
Daci_5938
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_4024 fimbrial biogenesis outer membrane usher protein.
  
     0.411
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.