Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Daci_0918KEGG: aav:Aave_4596 ribosomal subunit interface protein, putative. (126 aa)    
Predicted Functional Partners:
rpsI
PFAM: ribosomal protein S9; KEGG: ajs:Ajs_0626 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.836
rpmA
PFAM: ribosomal protein L27; KEGG: aav:Aave_3674 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.832
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
 
 0.827
rpsU
PFAM: ribosomal protein S21; KEGG: ajs:Ajs_2858 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.826
Daci_4909
PFAM: ribosomal protein L31; KEGG: ajs:Ajs_2363 ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
 
 0.825
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.824
rpmH
PFAM: ribosomal protein L34; KEGG: vei:Veis_5015 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.824
rplY
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
   0.823
rpsO
Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
   
 
 0.817
rpmB
PFAM: ribosomal protein L28; KEGG: ajs:Ajs_3384 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
   0.817
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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