STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0922PFAM: beta-lactamase domain protein; KEGG: rpa:RPA0365 beta-lactamase-like. (298 aa)    
Predicted Functional Partners:
Daci_0923
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family.
 
   
 0.664
Daci_0924
PFAM: Rhodanese domain protein; KEGG: rme:Rmet_2371 rhodanese-like protein.
  
 
 0.627
Daci_0921
PFAM: OsmC family protein; KEGG: acb:A1S_1522 predicted redox disulfide bond formation protein OsmC-like protein.
       0.604
Daci_1293
SMART: Rhodanese domain protein; KEGG: vei:Veis_2167 rhodanese domain protein.
 
 
 0.599
Daci_2338
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family.
 
 
 0.459
Daci_0907
PFAM: Glutathione S-transferase domain; KEGG: cvi:CV_2745 probable glutathione S-transferase family protein.
  
 
 0.443
Daci_5788
SMART: Rhodanese domain protein; KEGG: pna:Pnap_0538 rhodanese domain protein.
 
 
 0.413
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.