STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0932KEGG: vei:Veis_0197 PAP2 (acid phosphatase) superfamily protein-like protein. (258 aa)    
Predicted Functional Partners:
Daci_0931
PFAM: phosphoesterase PA-phosphatase related; KEGG: aav:Aave_4580 phosphoesterase, PA-phosphatase related protein.
  
  
 0.784
Daci_1718
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vei:Veis_4349 sulfatase.
 
   
 0.679
Daci_1142
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase.
 
   
 0.675
Daci_0934
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_4577 histidine kinase.
 
   
 0.673
Daci_2705
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: xft:PD1689 inner membrane protein.
 
   
 0.647
Daci_0836
KEGG: ajs:Ajs_4003 hypothetical protein.
  
     0.604
Daci_0933
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4578 two component transcriptional regulator, winged helix family.
       0.578
Daci_5447
KEGG: rfr:Rfer_1303 hypothetical protein.
  
     0.503
Daci_1527
KEGG: aav:Aave_1923 periplasmic lipoprotein-like protein.
  
     0.475
Daci_5470
PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_3656 MscS mechanosensitive ion channel.
  
     0.442
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.