STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0992PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0313 ABC-type multidrug transport system ATPase component-like protein. (328 aa)    
Predicted Functional Partners:
Daci_4460
KEGG: xom:XOO_0574 hypothetical protein.
  
 
 0.812
Daci_0991
KEGG: mpt:Mpe_A0314 hypothetical protein.
       0.792
Daci_1433
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: rso:RSp0521 probable chaperone transmembrane protein.
 
 
 0.696
Daci_2298
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C6418 AAA ATPase, central region.
  
 
 0.686
Daci_3774
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: aav:Aave_4256 heat shock protein 70.
 
 
 0.676
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.639
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.634
Daci_1595
ABC transporter related; PFAM: Dual specificity protein phosphatase; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0369 ABC transporter related.
  
   
 0.626
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
   0.603
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.600
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.