Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1026PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0605 ABC transporter-related protein; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
Daci_1027
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_0606 binding-protein-dependent transport systems inner membrane component.
 
 0.997
Daci_1028
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component.
 
 0.993
Daci_1030
KEGG: aav:Aave_0609 extracellular solute-binding protein, family 1.
 
 0.988
Daci_1025
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_0604 ABC transporter-related protein.
 
  
 
0.972
Daci_1029
KEGG: ajs:Ajs_0388 putative integral membrane protein.
 
    0.890
Daci_5595
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3170 binding-protein-dependent transport systems inner membrane component.
 
 
 0.819
Daci_5594
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3169 binding-protein-dependent transport systems inner membrane component.
 
 
 0.811
Daci_5466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0856 binding-protein-dependent transport systems inner membrane component.
 
 
 0.781
Daci_1024
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: aav:Aave_0603 transcriptional regulator, DeoR family.
 
   
 0.774
Daci_5305
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3305 binding-protein-dependent transport systems inner membrane component.
 
 
 0.751
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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