STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1058PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7506 hypothetical protein. (200 aa)    
Predicted Functional Partners:
Daci_1059
KEGG: rpa:RPA2648 hypothetical protein.
 
     0.893
Daci_1052
KEGG: bbt:BBta_4849 hypothetical protein.
 
     0.680
Daci_1018
KEGG: rpa:RPA2648 hypothetical protein.
 
     0.672
Daci_1053
PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein.
 
     0.626
Daci_1057
PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein.
 
     0.605
Daci_1051
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.587
Daci_4928
KEGG: vei:Veis_0214 hypothetical protein.
  
     0.575
Daci_3012
KEGG: aav:Aave_3368 hypothetical protein.
  
     0.574
Daci_1060
KEGG: aav:Aave_0628 molecular chaperone, HSP70 class.
       0.570
Daci_5313
KEGG: hch:HCH_02671 hypothetical protein.
 
     0.554
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.