STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1087TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1849 heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1061 aa)    
Predicted Functional Partners:
Daci_1088
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.957
Daci_1089
PFAM: outer membrane efflux protein; KEGG: har:HEAR1614 cobalt-zinc-cadmium resistance protein CzcC precursor (cation efflux system protein CzcC).
 
  
 0.931
Daci_0474
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3492 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.885
Daci_1715
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1793 cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.825
Daci_0019
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mxa:MXAN_7438 putative cobalt-zinc-cadmium resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.806
Daci_1714
PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance protein.
 
  
 0.804
Daci_4764
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_0295 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.777
Daci_1549
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xac:XAC2145 cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.739
Daci_2753
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_1545 putative heavy metal efflux pump, HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.693
Daci_3919
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reu:Reut_B5654 secretion protein HlyD.
 
 
 0.657
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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