Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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Daci_1100Putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: reu:Reut_B3890 helix-turn-helix, fis-type. (586 aa)    
Predicted Functional Partners:
Daci_4348
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.793
Daci_0674
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.792
Daci_1099
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: reu:Reut_B3891 propionyl-CoA carboxylase.
       0.526
Daci_1101
PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2614 putative efflux protein.
       0.495
Daci_1098
PFAM: conserved hypothetical protein; KEGG: rme:Rmet_4969 uncharacterized protein UPF0065.
       0.470
Daci_1096
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bbr:BB2689 biotin carboxylase.
       0.467
Daci_1097
PFAM: CoA-binding domain protein; KEGG: vei:Veis_0829 CoA-binding domain protein.
       0.467
Daci_1094
PFAM: thioesterase superfamily protein; KEGG: reh:H16_A0241 uncharacterized protein, possibly involved in aromatic compounds catabolism.
       0.461
Daci_1095
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_0828 biotin/lipoyl attachment domain-containing protein.
       0.461
Daci_5558
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (ferredoxin).
      
 0.406
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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