Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1131PFAM: Extracellular ligand-binding receptor; KEGG: aav:Aave_0768 extracellular ligand-binding receptor. (385 aa)    
Predicted Functional Partners:
Daci_4821
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1004 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.742
Daci_4820
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1003 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.731
Daci_0030
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.709
Daci_0031
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.705
Daci_5353
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.705
Daci_1132
Amidohydrolase; KEGG: aav:Aave_0770 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.686
Daci_0574
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3953 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.683
Daci_3027
PFAM: inner-membrane translocator; KEGG: maq:Maqu_3337 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.661
Daci_5354
PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.653
Daci_4333
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3255 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.619
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.