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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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Score
Daci_1137PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aav:Aave_1083 CMP/dCMP deaminase, zinc-binding. (171 aa)    
Predicted Functional Partners:
Daci_1136
PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1084 Tat (twin-arginine translocation) pathway signal sequence domain protein.
 
     0.790
Daci_1138
PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1093 twin-arginine translocation pathway signal.
 
     0.654
hisE
TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: ajs:Ajs_0777 phosphoribosyl-ATP pyrophosphohydrolase.
   
  
 0.595
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
 
  
 0.503
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.500
Daci_1141
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0774 hypothetical protein.
 
    
0.490
Daci_0976
PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease.
 
  
 0.477
Daci_1139
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1092 ABC transporter-related protein.
       0.457
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.454
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.452
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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