Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1153KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase. (415 aa)    
Predicted Functional Partners:
Daci_1154
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0782 ABC transporter-related protein.
 
    0.907
Daci_1155
KEGG: aav:Aave_0783 hypothetical protein.
 
    0.869
Daci_1156
PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.847
Daci_1159
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase.
 
    0.824
Daci_1158
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related.
 
    0.806
Daci_1157
PFAM: inner-membrane translocator; KEGG: aav:Aave_0785 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.799
Daci_0027
PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_4067 AMP-dependent synthetase and ligase.
 
    0.693
Daci_0028
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_4066 ABC transporter related.
 
    0.665
Daci_2042
Aromatic catabolism protein-like protein; KEGG: fal:FRAAL3454 hypothetical protein.
 
  
 0.649
Daci_5992
PFAM: thioesterase superfamily protein; KEGG: bov:BOV_A0326 hypothetical protein.
 
  
 0.618
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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