Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Daci_1192 | Daci_4347 | Daci_1192 | Daci_4347 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase. | Hypothetical protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase. | 0.887 |
| Daci_1192 | srkA | Daci_1192 | Daci_1193 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase. | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | 0.522 |
| Daci_1194 | srkA | Daci_1194 | Daci_1193 | KEGG: azo:azo0068 hypothetical protein. | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | 0.556 |
| Daci_2015 | srkA | Daci_2015 | Daci_1193 | PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 protein of unknown function DUF214. | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | 0.404 |
| Daci_2493 | srkA | Daci_2493 | Daci_1193 | PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor. | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | 0.487 |
| Daci_4347 | Daci_1192 | Daci_4347 | Daci_1192 | Hypothetical protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase. | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase. | 0.887 |
| Daci_4347 | srkA | Daci_4347 | Daci_1193 | Hypothetical protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase. | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | 0.400 |
| srkA | Daci_1192 | Daci_1193 | Daci_1192 | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase. | 0.522 |
| srkA | Daci_1194 | Daci_1193 | Daci_1194 | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | KEGG: azo:azo0068 hypothetical protein. | 0.556 |
| srkA | Daci_2015 | Daci_1193 | Daci_2015 | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | PFAM: protein of unknown function DUF214; KEGG: aav:Aave_3824 protein of unknown function DUF214. | 0.404 |
| srkA | Daci_2493 | Daci_1193 | Daci_2493 | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor. | 0.487 |
| srkA | Daci_4347 | Daci_1193 | Daci_4347 | Aminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. | Hypothetical protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase. | 0.400 |