Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1300PFAM: type II secretion system protein; KEGG: aav:Aave_4159 type II secretion system protein. (405 aa)    
Predicted Functional Partners:
Daci_1299
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.983
Daci_5395
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aav:Aave_1068 type II secretion system protein E.
 
 
 0.929
Daci_5488
KEGG: aav:Aave_3680 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
 
 
 0.929
Daci_5698
KEGG: aav:Aave_0916 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
 
 0.929
Daci_1301
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G.
 
  
 0.925
Daci_5703
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F.
  
  
 
0.918
Daci_5490
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.886
Daci_1309
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D.
 
  
 0.845
Daci_1068
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aav:Aave_0637 twitching motility protein.
 
  
 0.816
Daci_5689
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G.
 
  
 0.815
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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