Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1301TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G. (146 aa)    
Predicted Functional Partners:
Daci_1299
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.936
Daci_1300
PFAM: type II secretion system protein; KEGG: aav:Aave_4159 type II secretion system protein.
 
  
 0.925
Daci_5689
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G.
  
  
 
0.908
Daci_1309
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D.
 
  
 0.887
Daci_5692
KEGG: vei:Veis_3524 hypothetical protein.
 
 
 0.854
Daci_5698
KEGG: aav:Aave_0916 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
 
 0.847
Daci_5703
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F.
 
  
 0.830
Daci_5697
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_0917 general secretion pathway protein D.
 
  
 0.827
Daci_1305
KEGG: vei:Veis_0682 general secretory pathway protein K.
 
 
 0.822
Daci_1302
TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_0685 general secretion pathway protein H.
 
  
 0.787
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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