Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1307KEGG: aav:Aave_4152 general secretion pathway protein M. (191 aa)    
Predicted Functional Partners:
Daci_5695
KEGG: ajs:Ajs_0669 hypothetical protein.
     
 0.904
Daci_1308
KEGG: aav:Aave_4151 hypothetical protein.
     
 0.837
Daci_1306
PFAM: Fimbrial assembly family protein; KEGG: aav:Aave_4153 fimbrial assembly family protein.
     
 0.805
Daci_1309
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D.
     
 0.780
Daci_1310
KEGG: vei:Veis_0677 hypothetical protein.
       0.640
Daci_1305
KEGG: vei:Veis_0682 general secretory pathway protein K.
     
 0.632
Daci_1303
KEGG: vei:Veis_0684 general secretion pathway protein I.
     
 0.584
Daci_1302
TIGRFAM: general secretion pathway protein H; KEGG: vei:Veis_0685 general secretion pathway protein H.
       0.563
Daci_1304
KEGG: aav:Aave_4155 general secretion pathway protein J.
       0.540
Daci_1301
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_4158 general secretion pathway protein G.
     
 0.425
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.