STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1312PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: aav:Aave_4147 PpiC-type peptidyl-prolyl cis-trans isomerase. (311 aa)    
Predicted Functional Partners:
Daci_1311
KEGG: aav:Aave_4148 hypothetical protein.
       0.564
Daci_1316
PFAM: Methyltransferase type 12; KEGG: aav:Aave_4143 methyltransferase type 12.
  
   0.501
Daci_1313
PFAM: ABC-2 type transporter; KEGG: aav:Aave_4146 ABC-2 type transporter.
       0.493
Daci_1314
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4145 ABC transporter-related protein.
       0.493
Daci_3015
PFAM: peptidase M16 domain protein; KEGG: aav:Aave_3753 peptidase M16 domain protein; Belongs to the peptidase M16 family.
 
  
 0.487
Daci_1315
KEGG: aav:Aave_4144 hypothetical protein.
       0.479
yidC
60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
  
 0.434
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 
 0.419
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.