Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1314PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4145 ABC transporter-related protein. (424 aa)    
Predicted Functional Partners:
Daci_1313
PFAM: ABC-2 type transporter; KEGG: aav:Aave_4146 ABC-2 type transporter.
 
 0.999
Daci_1318
PFAM: glycosyl transferase family 2; methyltransferase small; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_4142 glycosyl transferase, family 2.
 
 
 0.860
Daci_1315
KEGG: aav:Aave_4144 hypothetical protein.
     
 0.803
Daci_1316
PFAM: Methyltransferase type 12; KEGG: aav:Aave_4143 methyltransferase type 12.
     
 0.733
Daci_1671
KEGG: ajs:Ajs_3540 ComF family protein.
   
    0.702
Daci_0321
PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0186 glycosyl transferase, family 2.
 
  
 0.650
Daci_6051
KEGG: aav:Aave_4785 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.612
Daci_1319
KEGG: vei:Veis_1228 glycosyl transferase, family 2.
 
  
 0.603
Daci_1277
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
   
 0.599
Daci_1275
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
   
 0.586
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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