STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa)    
Predicted Functional Partners:
Daci_1389
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.952
Daci_5842
KEGG: vei:Veis_3475 plasmid stability protein StbC.
 
 
 
 0.739
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   
 0.731
Daci_3758
KEGG: rpd:RPD_2062 SpoVT/AbrB-like.
  
 
 0.728
Daci_3961
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.620
Daci_1387
KEGG: aav:Aave_4317 putative transmembrane protein.
 
     0.533
Daci_5816
KEGG: reh:H16_B1205 hypothetical protein.
 
 
 0.507
Daci_1391
KEGG: ajs:Ajs_3741 hypothetical protein.
       0.494
Daci_1386
PFAM: protein of unknown function DUF88; KEGG: aav:Aave_4318 protein of unknown function DUF88.
     
 0.489
htpX
PFAM: peptidase M48 Ste24p; HtpX domain protein; KEGG: aav:Aave_4316 peptidase M48, Ste24p; Belongs to the peptidase M48B family.
       0.486
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.