Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1525KEGG: aav:Aave_1925 putative iron-regulated protein. (428 aa)    
Predicted Functional Partners:
Daci_1526
PFAM: protein of unknown function DUF1111; KEGG: pna:Pnap_2562 protein of unknown function DUF1111.
 
    0.988
Daci_1527
KEGG: aav:Aave_1923 periplasmic lipoprotein-like protein.
 
    0.956
Daci_1528
PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1461 hypothetical protein.
 
    0.927
Daci_4743
PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein, family 1.
  
    0.870
Daci_4621
KEGG: aav:Aave_3310 BFD domain protein (2Fe-2S)-binding domain protein.
  
    0.744
Daci_0140
KEGG: xcb:XC_1336 hypothetical protein.
   
    0.702
Daci_5055
KEGG: xcb:XC_1336 hypothetical protein.
   
    0.702
Daci_5056
KEGG: mpt:Mpe_A3729 hypothetical protein.
   
    0.701
Daci_4624
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_3313 biopolymer transport protein ExbD/TolR.
   
    0.700
Daci_6005
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_4551 biopolymer transport protein ExbD/TolR.
   
    0.700
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.