STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1584PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_A2522 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Daci_1583
PFAM: phospholipid/glycerol acyltransferase; KEGG: vei:Veis_1512 phospholipid/glycerol acyltransferase.
       0.742
Daci_1582
PFAM: amidohydrolase; KEGG: ajs:Ajs_3569 amidohydrolase.
       0.737
Daci_5716
Acetyltransferase; KEGG: reh:H16_B2397 acetyltransferase.
 
 
 0.534
Daci_5620
KEGG: reh:H16_B1869 cytochrome c, mono-and diheme variants.
  
     0.530
Daci_1579
Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.426
Daci_1578
PFAM: protein of unknown function DUF179; KEGG: ajs:Ajs_3573 protein of unknown function DUF179; Belongs to the UPF0301 (AlgH) family.
       0.423
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ajs:Ajs_3570 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
    0.413
Daci_1580
PFAM: phosphoribosyltransferase; KEGG: aav:Aave_0909 phosphoribosyltransferase.
  
    0.408
Daci_0670
PFAM: Sporulation domain protein; KEGG: aav:Aave_0415 sporulation domain protein.
  
    0.405
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.