Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1622Hypothetical protein; KEGG: smd:Smed_1667 MT-A70 family protein. (304 aa)    
Predicted Functional Partners:
Daci_1623
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: eba:ebA803 putative helicase.
  
    0.747
Daci_1624
PFAM: Primase 2; KEGG: bpl:BURPS1106A_0113 hypothetical protein.
       0.631
Daci_2034
KEGG: vei:Veis_4154 hypothetical protein.
  
     0.600
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
  
 
   0.513
Daci_1901
PFAM: regulatory protein MarR; KEGG: mpt:Mpe_A2923 transcriptional regulator, MarR family.
  
     0.469
Daci_1621
KEGG: aav:Aave_1756 transcriptional regulator CII, putative.
       0.461
Daci_4736
PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily MFS_1.
  
     0.456
Daci_0023
KEGG: ajs:Ajs_0007 hypothetical protein.
  
     0.441
Daci_1619
Putative phage repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: asa:ASA_3870 prophage transcriptional regulator.
  
    0.436
Daci_1483
TIGRFAM: TonB family protein; KEGG: ajs:Ajs_3655 TonB family protein.
  
     0.432
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.