Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
Daci_1633PFAM: peptidase S14 ClpP; KEGG: bbr:BB1694 phage-related Clp protease; Belongs to the peptidase S14 family. (287 aa)    
Predicted Functional Partners:
Daci_1632
TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bbr:BB1693 portal protein.
 
  
 0.960
Daci_1631
PFAM: Terminase; KEGG: bbr:BB1692 terminase.
 
     0.945
Daci_1634
KEGG: bbr:BB1695 major head protein.
 
    0.930
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
 
 0.902
Daci_1630
KEGG: bbr:BB1691 phage-related hypothetical protein.
  
    0.794
Daci_1627
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsh:Rsph17029_3313 HNH endonuclease.
 
  
 0.673
Daci_3411
SMART: DNA-directed DNA polymerase; KEGG: xfa:XF0683 phage-related DNA polymerase.
  
 
 0.666
Daci_3437
PFAM: peptidase S14 ClpP; KEGG: sbm:Shew185_0756 peptidase S14 ClpP; Belongs to the peptidase S14 family.
  
  
 
0.635
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.632
clpP-2
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.628
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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