Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1637TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: sit:TM1040_1063 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Daci_1636
KEGG: ppu:PP_1569 hypothetical protein.
  
 
 0.843
Daci_1638
TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family.
  
    0.809
Daci_1639
Hypothetical protein.
       0.773
Daci_1644
Conserved hypothetical protein-like protein; KEGG: rsq:Rsph17025_3709 glycoside hydrolase, family 24.
   
 
 0.673
Daci_1645
PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein.
   
 
 0.673
Daci_1640
KEGG: asu:Asuc_1245 hypothetical protein.
       0.593
Daci_1634
KEGG: bbr:BB1695 major head protein.
  
 
 0.587
Daci_1967
Hypothetical protein.
  
 
 0.587
Daci_1641
Hypothetical protein.
       0.578
Daci_1332
Hypothetical protein; KEGG: aav:Aave_1629 carbohydrate-binding family V/XII.
  
 
 0.533
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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