STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1657PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490. (1443 aa)    
Predicted Functional Partners:
Daci_1658
PFAM: surface antigen (D15); KEGG: aav:Aave_3955 surface antigen (D15).
 
 
 0.995
Daci_1659
KEGG: ajs:Ajs_3559 hypothetical protein.
       0.853
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
 
    0.755
Daci_1660
KEGG: ajs:Ajs_3558 GCN5-related N-acetyltransferase.
       0.735
Daci_5459
KEGG: aav:Aave_3642 hypothetical protein.
 
     0.731
Daci_2229
PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain protein.
 
     0.713
Daci_0413
KEGG: ajs:Ajs_0301 putative ATP synthase protein I.
  
     0.704
Daci_1661
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_3556 AAA ATPase, central domain protein.
       0.698
Daci_2381
KEGG: vei:Veis_1656 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.697
Daci_0875
PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family.
  
     0.695
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.