STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1663PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein. (152 aa)    
Predicted Functional Partners:
Daci_0317
KEGG: aav:Aave_0265 hypothetical protein.
  
     0.738
Daci_5221
PFAM: protein of unknown function DUF498; KEGG: aav:Aave_1236 protein of unknown function DUF498.
  
     0.732
Daci_2180
KEGG: aav:Aave_1165 hypothetical protein.
  
     0.721
Daci_1672
KEGG: aav:Aave_3908 biotin synthesis protein BioC.
 
     0.690
Daci_1251
PFAM: protein of unknown function DUF185; KEGG: ajs:Ajs_0497 protein of unknown function DUF185.
  
     0.685
Daci_5090
PFAM: NlpBDapX family lipoprotein; KEGG: ajs:Ajs_1009 NlpBDapX family lipoprotein.
 
     0.669
Daci_5464
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: aav:Aave_3648 FAD linked oxidase domain protein.
  
     0.666
Daci_5166
KEGG: ajs:Ajs_0971 putative transmembrane protein.
  
     0.645
Daci_1454
PFAM: protein of unknown function DUF484; KEGG: ajs:Ajs_3687 protein of unknown function DUF484.
  
     0.614
Daci_2192
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aav:Aave_1977 oxidoreductase FAD/NAD(P)-binding domain protein.
  
     0.614
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.