STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1678KEGG: aav:Aave_3904 putative transmembrane protein. (70 aa)    
Predicted Functional Partners:
Daci_1677
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: ajs:Ajs_3534 cytochrome c oxidase assembly protein CtaG/Cox11.
  
    0.833
Daci_1682
KEGG: ajs:Ajs_3529 hypothetical protein.
 
    0.768
Daci_2423
KEGG: aav:Aave_2200 protein of unknown function DUF339.
  
     0.737
Daci_1680
KEGG: ajs:Ajs_3531 putative transmembrane protein.
  
     0.724
Daci_1679
PFAM: cytochrome c oxidase subunit III; KEGG: ajs:Ajs_3532 cytochrome c oxidase, subunit III.
 
    0.673
Daci_0526
KEGG: ajs:Ajs_3888 hypothetical protein.
  
     0.653
Daci_1674
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.648
Daci_5347
KEGG: aav:Aave_1882 hypothetical protein.
  
     0.628
Daci_1676
Hypothetical protein.
       0.610
Daci_0832
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
     0.601
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.