Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1711PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase. (551 aa)    
Predicted Functional Partners:
Daci_1712
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
       0.658
Daci_1713
TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1629 two-component response regulator.
       0.658
Daci_5291
KEGG: aav:Aave_1961 hypothetical protein.
  
     0.533
Daci_1714
PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance protein.
 
   
 0.532
Daci_2336
PFAM: regulatory protein LuxR; KEGG: rpb:RPB_1819 transcriptional regulator, LuxR family.
  
     0.514
Daci_3012
KEGG: aav:Aave_3368 hypothetical protein.
  
     0.514
Daci_3806
KEGG: har:HEAR0855 hypothetical protein.
  
     0.494
Daci_1657
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 protein of unknown function DUF490.
  
    0.453
Daci_0690
KEGG: aav:Aave_0425 hypothetical protein.
 
     0.448
Daci_5070
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2194 TonB-dependent receptor.
  
     0.447
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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