Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1722KEGG: xcb:XC_3128 hypothetical protein. (253 aa)    
Predicted Functional Partners:
Daci_1723
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
   
 0.856
Daci_1718
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vei:Veis_4349 sulfatase.
 
  
 0.743
Daci_2705
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: xft:PD1689 inner membrane protein.
 
  
 0.715
Daci_1142
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase.
 
  
 0.664
Daci_1721
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bbt:BBta_7296 cadmium-exporting ATPase.
 
     0.602
Daci_5251
KEGG: aav:Aave_1202 small-conductance mechanosensitive channel-like protein.
  
     0.461
Daci_1711
PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase.
 
  
 0.429
Daci_5425
PFAM: Inner membrane CreD family protein; KEGG: aav:Aave_0316 inner membrane CreD family protein.
  
     0.427
Daci_0140
KEGG: xcb:XC_1336 hypothetical protein.
  
     0.423
Daci_2034
KEGG: vei:Veis_4154 hypothetical protein.
  
     0.420
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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