Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_1728Hypothetical protein. (135 aa)    
Predicted Functional Partners:
Daci_1729
Putative two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: bbr:BB4471 two-component response regulator.
     
 0.737
Daci_1727
KEGG: aav:Aave_3789 putative TIS1421-transposase orfA protein.
       0.547
Daci_0632
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ajs:Ajs_3828 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
 
 0.476
Daci_2298
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C6418 AAA ATPase, central region.
   
 0.467
Daci_1726
KEGG: aav:Aave_3790 transposase, IS4 family protein.
       0.432
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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