STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1729Putative two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: bbr:BB4471 two-component response regulator. (243 aa)    
Predicted Functional Partners:
Daci_1092
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
 0.980
Daci_1712
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
 0.979
Daci_0452
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
 0.977
Daci_0876
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_3999 two component transcriptional regulator, winged helix family.
  
     0.739
Daci_1728
Hypothetical protein.
     
 0.738
Daci_3802
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_1450 two component transcriptional regulator, winged helix family.
  
     0.730
Daci_1143
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1953 two component transcriptional regulator, winged helix family.
  
     0.728
Daci_1322
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_4138 two component transcriptional regulator, winged helix family.
  
     0.719
Daci_4239
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psa:PST_2709 probable two-component response regulator.
  
     0.719
Daci_3959
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_1861 two component transcriptional regulator, winged helix family.
  
     0.718
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.