STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1758PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1439 enoyl-CoA hydratase/carnithine racemase. (263 aa)    
Predicted Functional Partners:
Daci_0802
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpa:BPP1005 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   0.841
Daci_1759
PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: reu:Reut_B4596 CoA-binding.
  
  
 0.824
Daci_1198
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3718 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.743
Daci_1757
PFAM: conserved hypothetical protein; KEGG: reh:H16_B1440 probable extra-cytoplasmic solute receptor.
       0.661
Daci_1760
PFAM: MmgE/PrpD family protein; KEGG: reh:H16_B1436 2-methylcitrate dehydratase.
 
    0.644
Daci_3288
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: aav:Aave_3073 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.604
Daci_5563
KEGG: ajs:Ajs_3548 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.538
Daci_0025
KEGG: ajs:Ajs_0014 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.536
Daci_0177
Thiolase; KEGG: ajs:Ajs_0129 thiolase.
  
 0.536
Daci_0192
KEGG: ajs:Ajs_0124 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.536
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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