Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1765TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: mpt:Mpe_A2892 malonate decarboxylase gamma subunit. (233 aa)    
Predicted Functional Partners:
Daci_1766
TIGRFAM: malonate decarboxylase, beta subunit; KEGG: mpt:Mpe_A2893 beta subunit of malonate decarboxylase.
 
  
 0.965
mdcB
Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
     0.959
Daci_1764
TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: rfr:Rfer_1847 malonate decarboxylase.
 
     0.959
Daci_1767
TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: mpt:Mpe_A2894 delta subunit of malonate decarboxylase.
 
     0.959
Daci_1768
TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mpt:Mpe_A2895 alpha subunit of malonate decarboxylase.
 
     0.958
Daci_1762
KEGG: rfr:Rfer_1849 (acyl-carrier protein) S-malonyltransferase.
 
  
 0.903
Daci_1769
PFAM: Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: mpt:Mpe_A2896 dicarboxylate carrier protein.
 
    0.692
Daci_5727
PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: reh:H16_B1758 allophanate hydrolase.
   
   0.686
Daci_0007
TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: vei:Veis_4579 carbamoyl-phosphate synthase L chain, ATP-binding.
  
 0.662
Daci_1095
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_0828 biotin/lipoyl attachment domain-containing protein.
  
 0.662
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.