STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1774PFAM: NADPH-dependent FMN reductase; KEGG: pfo:Pfl_3915 FMN reductase. (209 aa)    
Predicted Functional Partners:
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.995
ssuD-2
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.980
Daci_2237
PFAM: Rhodanese domain protein; KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase.
  
  
  0.920
Daci_4654
Phosphoadenylyl-sulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
   
 
 0.920
Daci_5151
PFAM: Rhodanese domain protein; KEGG: mms:mma_0256 thiosulfate sulfurtransferase.
  
  
  0.916
Daci_2006
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_1586 taurine dioxygenase.
   
 
  0.909
Daci_2012
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A1602 taurine dioxygenase.
   
 
  0.909
Daci_4891
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vha:VIBHAR_02787 hypothetical protein.
   
 
  0.909
Daci_4652
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: aav:Aave_3053 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein.
   
 
 0.908
Daci_5383
TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: aav:Aave_3449 riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.908
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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