STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1796KEGG: pol:Bpro_0197 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. (341 aa)    
Predicted Functional Partners:
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
    
 0.914
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
    
 0.914
Daci_1795
PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 putative aldolase.
 
     0.809
Daci_1794
PFAM: regulatory protein MarR; KEGG: bra:BRADO6297 putative transcriptional regulatory protein, MarR family.
 
     0.754
Daci_1797
PFAM: CutA1 divalent ion tolerance protein; KEGG: ajs:Ajs_3521 CutA1 divalent ion tolerance protein.
       0.608
Daci_1793
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase.
       0.520
Daci_3050
KEGG: mms:mma_0439 small permease component of tripartite tricarboxylate transporter.
 
     0.500
Daci_3795
PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 probable alkylated DNA repair protein.
   
    0.497
Daci_1792
PFAM: flavin reductase domain protein FMN-binding; KEGG: aau:AAur_0247 putative monooxygenase component B.
       0.411
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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