Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1849PFAM: isochorismatase hydrolase; KEGG: aav:Aave_3931 isochorismatase hydrolase. (231 aa)    
Predicted Functional Partners:
Daci_1851
PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_3929 alpha/beta hydrolase fold.
 
 0.992
maiA-2
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
 
 0.987
maiA
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
 
 0.961
Daci_1850
KEGG: aav:Aave_3930 hypothetical protein.
 
  
 0.950
Daci_1848
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_3932 isoquinoline 1-oxidoreductase.
 
     0.634
Daci_1853
PFAM: monooxygenase FAD-binding; KEGG: aav:Aave_3927 salicylate 1-monooxygenase.
 
  
 0.615
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
  
    0.487
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: ajs:Ajs_3501 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.441
Daci_3107
PFAM: nitroreductase; KEGG: hch:HCH_03586 nitroreductase.
  
  
 0.425
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.