STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1850KEGG: aav:Aave_3930 hypothetical protein. (361 aa)    
Predicted Functional Partners:
Daci_1851
PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_3929 alpha/beta hydrolase fold.
 
  
 0.991
Daci_1853
PFAM: monooxygenase FAD-binding; KEGG: aav:Aave_3927 salicylate 1-monooxygenase.
 
 
 0.977
Daci_1849
PFAM: isochorismatase hydrolase; KEGG: aav:Aave_3931 isochorismatase hydrolase.
 
  
 0.947
maiA-2
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.922
Daci_1848
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: aav:Aave_3932 isoquinoline 1-oxidoreductase.
 
   
 0.829
maiA
Asp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.781
Daci_1859
PFAM: regulatory protein MarR; KEGG: aav:Aave_3922 transcriptional regulator, MarR family.
 
  
 0.683
Daci_1855
Gluconate 2-dehydrogenase (acceptor); KEGG: aav:Aave_3925 cytochrome c, class I.
 
     0.629
Daci_3930
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: spe:Spro_2491 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
   
 0.535
Daci_0888
PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: aav:Aave_3866 ferritin, Dps family protein.
  
     0.483
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.