Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Daci_1870TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pna:Pnap_2119 muconate and chloromuconate cycloisomerases. (395 aa)    
Predicted Functional Partners:
Daci_1869
KEGG: ajs:Ajs_0141 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase.
 
 
 0.998
Daci_1867
PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pna:Pnap_2116 intradiol ring-cleavage dioxygenase.
 
 
 0.996
Daci_3128
PFAM: intradiol ring-cleavage dioxygenase; KEGG: bja:blr0926 catechol 1,2-dioxygenase.
 
 
 0.929
Daci_0373
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase.
  
 
 0.922
Daci_1793
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: rme:Rmet_3321 dienelactone hydrolase.
   
 
 0.911
Daci_5324
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_3316 carboxymethylenebutenolidase.
   
 
 0.911
Daci_1868
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2117 uncharacterized protein UPF0065.
       0.570
Daci_0610
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_2646 Rieske (2Fe-2S) region.
 
  
 0.536
Daci_2901
KEGG: aav:Aave_1797 peptidase M14, carboxypeptidase A.
  
   
 0.485
Daci_2192
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aav:Aave_1977 oxidoreductase FAD/NAD(P)-binding domain protein.
  
  
 0.478
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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