STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1900PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_1696 phenylacetic acid degradation-related protein. (204 aa)    
Predicted Functional Partners:
Daci_1901
PFAM: regulatory protein MarR; KEGG: mpt:Mpe_A2923 transcriptional regulator, MarR family.
       0.562
Daci_1902
PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4323 major facilitator superfamily MFS_1.
       0.480
Daci_2042
Aromatic catabolism protein-like protein; KEGG: fal:FRAAL3454 hypothetical protein.
 
     0.479
Daci_0207
PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0100 uncharacterized domain 1.
  
     0.466
Daci_2382
KEGG: aav:Aave_2154 putative transporter signal peptide protein.
  
     0.460
Daci_5992
PFAM: thioesterase superfamily protein; KEGG: bov:BOV_A0326 hypothetical protein.
 
     0.423
Daci_3307
PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1679 extracellular ligand-binding receptor.
  
     0.409
Daci_0175
PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0131 uncharacterized domain 1.
  
     0.400
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.