STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1936Hypothetical protein. (65 aa)    
Predicted Functional Partners:
Daci_1934
Hypothetical protein.
       0.773
Daci_1935
Hypothetical protein.
       0.773
Daci_1937
KEGG: sit:TM1040_1689 hypothetical protein.
       0.773
Daci_1938
Hypothetical protein.
       0.773
Daci_1939
PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein.
       0.773
Daci_1940
RNA polymerase, sigma-24 subunit, ECF subfamily.
       0.741
Daci_1931
KEGG: ecs:ECs1073 hypothetical protein.
       0.459
Daci_1932
Hypothetical protein.
       0.459
Daci_1933
KEGG: bbr:BB3510 phage-related hypothetical protein.
       0.459
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.