STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_1992TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: vei:Veis_3999 thiamine pyrophosphate enzyme domain protein TPP-binding; Belongs to the TPP enzyme family. (603 aa)    
Predicted Functional Partners:
Daci_0755
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 phosphate butyryltransferase.
  
 0.933
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.911
Daci_2006
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_1586 taurine dioxygenase.
  
 
 0.905
Daci_2012
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A1602 taurine dioxygenase.
  
 
 0.905
Daci_4891
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vha:VIBHAR_02787 hypothetical protein.
  
 
 0.905
Daci_4866
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: aav:Aave_3111 acetolactate synthase, small subunit.
 
 
 0.901
Daci_1995
Cobaltochelatase; PFAM: Cobalt chelatase CobT subunit; KEGG: reu:Reut_B3756 CobT protein.
 
     0.846
Daci_1993
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reu:Reut_B3754 regulatory protein, IclR.
 
     0.774
Daci_2019
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0685 putative taurine dehydrogenase, large subunit.
  
  
 0.767
Daci_1994
Cobaltochelatase; KEGG: reu:Reut_B3755 putative MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
     0.750
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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